BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D06SP1|AL429892
(762 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1564 1259 0.0
>3x_Contig1564
Length = 11038
Score = 1259 bits (633), Expect = 0.0
Identities = 729/763 (95%), Gaps = 1/763 (0%)
Strand = Plus / Minus
Query: 1 ttgktcggataaccaccaaatgaatttcctgctcctaaaaaacaaccaactccaaaggca 60
||| ||||| |||||||| ||||||| |||||||||||||| |||||||||||| |||||
Sbjct: 9679 ttggtcggagaaccaccagatgaattgcctgctcctaaaaagcaaccaactccagaggca 9620
Query: 61 aaaaaaattatcgaaacaatcatcagaacgca-tcaaagtattggtctttctttaadaac 119
|||||||| ||||||||| ||||||||||||| |||||||||||||||| |||||| |||
Sbjct: 9619 aaaaaaatgatcgaaacagtcatcagaacgcagtcaaagtattggtcttgctttaagaac 9560
Query: 120 aaacatggaaataacgggatcaatttcaaggatgctataacttcaacattggacacaagg 179
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9559 agacatggaaatgacgggatcaatttcaaggatgctataacttcaacattggacacaagg 9500
Query: 180 aatttccctttacaaaattctattagagaataccaagtttcacatctctcatcacaattc 239
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||
Sbjct: 9499 aatttccctttacaaaatgctattagagaataccaagtttcacagctctcatcacaattc 9440
Query: 240 aactttgttcaacttccaattcttgatttgaatttaccagcaaatactattctatgcacc 299
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9439 aactttgttcaacttccaattcttgatttgaatttaccagcaaatactatgctatgcacc 9380
Query: 300 tcaggtatccaaaactcttaaacacttgtggtgatcgttcattacacaccagatatttgg 359
|||||||||||| ||||| ||||||||||||||||||| ||| |||||||||| ||||||
Sbjct: 9379 tcaggtatccaagactctgaaacacttgtggtgatcgtgcatgacacaccagagatttgg 9320
Query: 360 tctgaacgttacacacanacaggaattatttatccttctagttcaattatcgtctacaat 419
||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 9319 tctgaacgtgacacacagacaggaattattgatccttctagttcaattatcgtcgacaat 9260
Query: 420 tcttttaagatgatcaattgggcaatggatanaagatatggaataatttacataaatata 479
|||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||
Sbjct: 9259 gctttgaagatgatcaattgggcaatggatagaagatatggaataattgacataaatata 9200
Query: 480 cctcaaacactcttttaacattccaactacccaggttttgcgtcatcacaagagattctg 539
||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct: 9199 cctcaaacactctttgaacatgccaactacccaggtgttgcgtcatcacaagagattctg 9140
Query: 540 atatatttatgggataactacttgaaattcttccaaaatctacaaaaggkggcatttatc 599
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9139 atatatttatgggataactacttgaaattcttccaaaatctacaaaaggtggcatttatc 9080
Query: 600 ggcattggagatgcctacggaggcattgtccatttattaggccatagggataccaggtca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9079 ggcattggagatgcctacggaggcattgtccatttattaggccatagggataccaggtca 9020
Query: 660 gtggtaaaatgtgcaatatcatttttagacaaaaaacctcttaaagtaatggtgccatta 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9019 gtggtaaaatgtgcaatatcatttttagacaaaaaacctcttaaagtaatggtgccatta 8960
Query: 720 attgacgaaacgttaggagattggtatttcaagrattccttgg 762
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8959 attgacgaaacgttaggagattggtatttcaagaattccttgg 8917
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6540
Number of Sequences: 1807
Number of extensions: 6540
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 762
length of database: 10,358,551
effective HSP length: 16
effective length of query: 746
effective length of database: 10,329,639
effective search space: 7705910694
effective search space used: 7705910694
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)